The Call for EOSC FAIR Champions is Open!

EOSC FAIR Champions

FAIR-IMPACT, a Horizon Europe project in which LifeWatch ERIC partners, has announced the opening of its call for EOSC FAIR Champions, a group of 12 experts that will be actively engaged in analysing and shaping FAIR data policies and practices in their field who will be on board to act as ambassadors for FAIR, engage their community, and advocate for adoption of the project results.

The candidate Champions will be engaged in identifying research data gaps and needs within their communities, to create broader engagement with FAIR, and to shape and disseminate the outcomes of the FAIR-IMPACT project, for instance by facilitating national roadshows in their country, and contributing to the development of FAIR implementation stories.

FAIR-IMPACT is looking for Champions who have broad expertise in FAIR policy and/or practice, bring strong research data advocacy experience and excellent communications skills, are driven to help mobilise others to generate more FAIR data on policy and/or practice level, and are keen to share best practices. Gender diversity, a balanced geographical and stakeholder representation, and broad interdisciplinary expertise across FAIR policy and practice will be ensured in the evaluation of the profiles.

Click here for more details on how to apply. The deadline to apply is Friday 10 March at 17:00 CET.

Kick-off meeting of ITINERIS, the Integrated Environmental Research Infrastructures System

ITINERIS

On 19 December 2022, the kick-off meeting of ITINERIS, the Italian Integrated Environmental Research Infrastructures System, was held in Rome. The project, funded with €155 million from the PNRR and coordinated by the CNR (the Italian National Research Centre), involves 22 European research infrastructures.

Gelsomina Pappalardo, CNR researcher and Italian delegate at the ESFRI Forum, who chaired the event, highlighted that: “this is a unique project of its kind, even if it has a formal duration of 30 months, it will change the future of Research Infrastructures in Italy with an impact on research for at least the next ten years”. The project aims to establish an Italian hub for accessing data, services and facilities for interdisciplinary study in the four environmental domains: atmosphere, marine, terrestrial biosphere and geosphere.

Work Package 2 of the project, presented by Carmela Cornacchia (CNR-IMAA Potenza) in collaboration with Ilaria Rosati (CNR-IRET Lecce and LifeWatch Italy) is in fact dedicated to “access”. Access to research infrastructures refers to the regulated use of research infrastructures, and to the services offered by them, be it physical, remote, or virtual access – as in the case of data and digital services. With WP2, ITINERIS aims to ensure the FAIRness of the access as well (Findable, Accessible, Interoperable, Reproducible). The challenge is to coordinate the 22 infrastructures towards alignment with the requirements set by the European Open Science Cloud (EOSC).

WP3, coordinated by Alberto Basset, Director of the LifeWatch ERIC Service Centre and Manager of the LifeWatch Italy Joint Research Unit (JRU), will take care of training internal staff and future users of the infrastructures. More than 60 training courses are foreseen for the next 30 months.

After the presentation of WP4, 5, 6 and 7 dedicated to the four domains, each with the development of specific case studies, Antonello Provenzale, CNR-IGG and Coordinator of the LifeWatch Italy JRU, presented WP8. This WP will develop the Virtual Research Environments for data analysis and modelling of future scenarios in ITINERIS’ domains of interest. “Having a central hub that functions as a gateway for users to the infrastructures” said Provenzale, “will make us an example at a European level”.

Article originally posted on LifeWatch Italy.

Frontiers Paper on Crustaceans Workflow

Crustaceans Workflow

A scientific paper about the LifeWatch ERIC Crustaceans Workflow was published on 4 January 2023 in Frontiers on Environmental Science, the community-driven and peer-reviewed research journals dedicated to making science open, so that scientists can collaborate better and innovate faster to deliver solutions that enable healthy lives on a healthy planet.

LifeWatch ERIC, the e-Science European infrastructure for biodiversity and ecosystem research, launched the Internal Joint Initiative in October 2019 on Non-indigenous Species and Invasive Alien Species (NIS-IAS) because they are considered one of the major drivers of biodiversity and ecosystem change. In this paper, the case study on the trophic biogeography of invasive crustaceans is presented, describing the procedures, resources, and analytical web services implemented in the Tesseract Virtual Research Environment to investigate the trophic habits of two invasive taxa by using carbon and nitrogen stable isotope data. The case study offers a number of analytical tools to determine the variability of the trophic position of invasive crustaceans in a spatially-explicit context and to model it as a function of relevant environmental predictors.

Literature-based stable isotope data of the Atlantic blue crab Callinectes sapidus and the Louisiana crayfish Procambarus clarkii were used to evaluate the functionalities and outcomes of the workflow. The results of the study reveal, both at population-scale and individual-scale, the existence of significant relationships between temperature related variables and the trophic positions of the two species. At relatively higher temperatures, omnivorous invaders occupy higher trophic levels in food webs and become more carnivorous, which in conditions of climate change is likely to increase their overall impact.

Moreover, the functionalities of the Crustacean Workflow within the Tesseract VRE offered by LifeWatch ERIC can be adapted to a wide range of species, and will be further improved to support researchers in monitoring and predicting trophic-related impacts of NIS-IAS. The VRE will also support policymakers and stakeholders in the implementation of effective management and control measures to limit the negative effects of bioinvaders in recipient environments.

Read or download the whole paper here (Di Muri et al).

Click here for links to two related papers:
“An individual based-based dataset of carbon and nitrogen isotopic data of Callinectes sapidus in invaded Mediterranean waters“
“Individual and population-scale carbon and nitrogen isotopic values of Procambarus clarkii in invaded freshwater systems“

LifeWatch ERIC Wins Prize at AI for Science Workshop

AI for Science

The AI for Science Workshop was held from 12–16 December in Rabat, Morocco, organised by NASSMA, MASCIR, and the Mohammed VI Polytechnic University. Artificial Intelligence offers the promise of revolutionising the way scientific discoveries are done, and tremendously accelerate their pace. However, major challenges still remain in this nascent field of AI for Science, and the goal of this workshop was to address and discuss challenges such as novel methods for AI for Science, tackling the right set of scientific problems, enabling scientific discoveries with AI, and the journey from scientific discovery to a practical application. 

LifeWatch ERIC was represented at the event by its Data Science & Artificial Intelligence Assistant, Yassir Benhammou, who exhibited the ERDF-funded SmartEcoMountains project, which combines interdisciplinary perspectives to obtain and integrate data on how global change affects mountain ecosystems. He displayed a poster on the project “Satellite RGB images and Time Series datasets for automatic Global Land Use/Cover mapping using Deep Learning”, presenting two Smart Global datasets, TimeSpec4LULC* and Sentinel2GlobalLULC**, to train Machine Learning models to perform land use/cover mapping. These two datasets are published in two renowned journals: Earth System Science Data (IF-2021=11,81) and Scientific Data (IF-2021=8,5). On the final day of the event, it won the “best poster prize”. LifeWatch ERIC is delighted and honoured by the recognition afforded by the panel, which featured representatives of pioneers in AI such as UM6P, DeepMind, University of Cambridge, the Morrocan Foundation for Advanced Science, Innovation and Research and Google.

For more information on projects in which the infrastructure is involved, please see our related projects page.

*Authors of TimeSpec4LULC: Rohaifa Khaldi, Domingo Alcaraz-Segura, Emilio Guirado, Yassir Benhammou, Abdellatif El Afia, Francisco Herrera, Siham Tabik. Article link: https://essd.copernicus.org/articles/14/1377/2022/

**Authors of Sentinel2GlobalLULC: Yassir Benhammou, Domingo Alcaraz-Segura, Emilio Guirado, Rohaifa Khaldi, Boujemâa Achchab, Francisco Herrera, Siham Tabik. Article link: https://www.nature.com/articles/s41597-022-01775-8

The ALL-Ready Project 3rd Pilot Network Meeting

ALL-Ready Pilot Network Meeting

Following the successful ALL-Ready regional workshop held in its ICT-Core premises in Seville at the start of the month, LifeWatch ERIC played an active part in the project’s 3rd Pilot Network Meeting. The meeting took place in Budapest (Hungary) from 21 – 23 November 2022,  organised by the Hungarian Research Institute of Organic Agriculture (ÖMKi). ALL-Ready is a European Commission-funded HORIZON2020 project addressing the multiple challenges that agricultural systems are facing today, including climate change, biodiversity loss, dwindling resources, and degradation of soil and water quality.

During the meeting, LifeWatch ERIC presented the Agroecology Virtual Lab for Living Labs and Research Infrastructure as a key e-tool to boost the acceleration of the Agroecology transition in the EU, by promoting networking and interaction among the Agroecology community. A training session was also given to the pilot members of the network to test the performance of the first version of the application.

LifeWatch ERIC Agroecology Virtual Lab provides seamless access to all services that the Agroecology community might need (e.g., data collection, sharing and visualisation) to collaborate and co-create new knowledge. These different functionalities will not only allow the community to work with data in a more efficient way, but boost innovative collaboration pathways between Agroecology stakeholders (Living Labs, Research Infrastructures, end-users, policy-makers, citizens, etc.).

To learn more about different projects in which LifeWatch ERIC is involved, please visit the Related Projects page.

Celebrating 15 Years of WoRMS

WoRMS 15 years

In 2007, the digitally available European Register of Marine Species (ERMS) expanded into a World Register of Marine Species, et voila, WoRMS was born. WoRMS is hosted by VLIZ, which is the national focal point for LifeWatch Belgium. In 2022, WoRMS can be seen as the number one authoritative classification and catalogue of marine names.

WoRMS is managed by a small Data Management Team (DMT) and an elected Steering Committee (SC), but the actual driving force behind the high-quality content of WoRMS is the Editorial Board. Completing and correcting WoRMS requires an enormous effort and is entirely dependent on the expertise and time of the editors. On top of that, it is a race against time as species are at risk of disappearing due to changing environmental conditions such as warming, pollution and acidification, before they are discovered.

To celebrate its 15th birthday and 15 years of collaboration with (taxonomic) experts all over the globe, WoRMS designed an exclusive t-shirt, with proceeds used to coordinate and disseminate funds to the WoRMS editors. With the funds raised, editors will be able to continue to fill gaps in coverage, expand the content and enhance the quality of taxonomic databases, attract interns and students to assist in the verification of taxonomic information, and purchase scientific literature.

And there’s more! Check out all the stories below on the LifeWatch Belgium website in celebration of 15 years of WoRMS!

2 – Get to know the WoRMS editors here!

3 – The growth of WoRMS over the years

4 – Developing the database

5 – Setting priorities to address gaps

6 – Behind the scenes

7 – Taxonomy – a science, an art, or a battleground?

8 – The challenge of author names

9 – Dark literature

10 – Type localities

11 – Endless possibilities

12 – Supporting the volunteers

13 – Beyond classical taxonomy

14 – Who uses WoRMS?

15 – Not reinventing the wheel

LifeWatch ERIC to feature prominently at ICSOC 2022

ICSOC

ICSOC, the International Conference on Service-Oriented Computing, is the premier international forum for academics, industry researchers, developers, and practitioners to report and share groundbreaking work in service-oriented computing. ICSOC fosters cross-community scientific excellence by gathering experts from various disciplines, such as services science, data science, management science, business-process management, distributed systems, wireless and mobile computing, cloud and edge computing, cyber-physical systems, Internet-of-Things (IoT), scientific workflows, artificial intelligence, machine learning, and services and software engineering.

This congress provides a high-quality forum for presenting results and discussing ideas that further our knowledge and understanding of the various aspects (e.g. application and system aspects) related to Service Computing with particular focus on artificial intelligence, machine learning, big data analytics, IoT, and emerging technologies including quantum computing.

ICSOC 2022, the 20th event in this series, will take place in Seville, Spain from 29 November – 2 December 2022. Inkeeping with ICSOC tradition, it will feature visionary keynote presentations, research and industry presentations, a vision track, workshops, tutorials, and a PhD track.

LifeWatch ERIC is one of the main sponsors and will give two presentations. On Wednesday, 30 November, Antonio José Sáenz-Albanés, ICT Core Operations Coordinator at LifeWatch ERIC, will do a presentation on ‘LifeWatch ERIC distributed e-infrastructure, challenges and goals’. And on Friday, 2 December, Juan Miguel González-Aranda, LifeWatch ERIC CTO and head of LifeWatch Spain, will participate in a session in collaboration with the Digital Agency of Andalusia and will talk about ‘LifeWatch ERIC, an Open e-Science & Data Service Oriented distributed panEuropean Research Core Infrastructure: AstarteWatch, from Andalusia to the rest of the World’.

In the organising committee of ICSOC 2022, the honorary chair is Pablo Cortés, General Secretary of Research and Innovation of Junta de Andalucía, Spain. The general co-chairs are Pablo Fernández and Antonio Ruiz (University of Seville, Spain). The programme co-chairs are Brahim Medjahed (University of Michigan-Dearborn, United States); Mario Piattini (University of Castilla-La-Mancha, Spain) and Lina Yao (UNSW, Australia). The local chair is Jose Maria Garcia (University of Seville, Spain) and the finance chair is Bernd Krämer (Fern University, Germany). 

In the five main thematic areas of this international conference, the Service-Oriented Technology Trends Chair is Marco Aiello (University of Stuttgart, Germany); the Machine Learning / Artificial Intelligence Chair is Xianzhi Wang (University of Technology Sydney, Australia); the Big Data Analytics Chair is Qi Yu (Rochester Institute of Technology, United States); the Internet of Things Chair is Azadeh Ghari Neiat (Deakin University, Australia); and the Emerging Technologies Chair is Manuel Resinas (University of Seville, Spain). 

LifeWatch ERIC at the International Conference on Ecological Sciences in Metz

Metz

The SFE2, GFÖ & EEF International Conference on Ecological Sciences is taking place in Metz this week, from 21–25 November, organised by the LIEC (University of Lorraine, CNRS) and other labs in northeastern France working in the fields of ecology and evolution. LifeWatch ERIC is not only there with a stand, but is contributing to the agenda with cutting-edge topics in the field of biodiversity– namely, Non-indigenous and Invasive Species (NIS), considered one of the major threats to ecosystem functioning and one of the main drivers of biodiversity loss.

The European Infrastructure for Biodiversity and Ecosystem Research is putting on two events at the Conference on Ecological Sciences, a Workshop on 21 November to train scientists in the use of e-tools and resources to address key ecological questions on Non-indigenous and Invasive Species, and a Symposium on European Research Infrastructures (RIs).

The Workshop consists of a 4-hour training session in which interested attendees learn how to access and use LifeWatch ERIC Virtual Research Environments (VREs) from their personal computers, in which NIS case studies and workflows are embedded. The hands-on session is introduced by an interactive session to guide the attendees on their first approach to the VREs and related e-tools.

At the Symposium on 24 November, the discussion focuses on major scientific and societal challenges presented by biodiversity loss. Speakers are to present their RIs, then illustrate the services and facilities that these RIs can provide to address major threats for biodiversity (e.g., alien species, habitat degradation and fragmentation, etc.) and tackle climate change impacts affecting ecosystem functioning and services. It is therefore also an occasion to explore multidisciplinary expertise and synergies on these key topics.

Please follow the links for more information on the Workshop and the Symposium.

New Synergies in the Cartuja Science and Technology Park

PCT Cartuja

At the LifeWatch ERIC ICT-Core & FEDERTECH headquarters in the Cartuja Science and Technology Park (PCT Cartuja) in Seville, a working meeting took place on Friday 18 November between Juan Miguel González-Aranda, LifeWatch ERIC CTO and Head of LifeWatch Spain, and Francisco Rodríguez Rubio, Director of the Higher Technical School of Engineering of Seville, whose headquarters are also in the PCT Cartuja. The aim of the meeting was to advance agreements between both entities in order to develop research and innovation initiatives in the field of e-biodiversity and the sustainable management of ecosystem services; a synergy that will promote the generation of knowledge and excellence from said science and technology park within the framework of the European Union, with a global vision.

The Higher Technical School of Engineering (ETSi) of the University of Seville is a university centre of international reference in the field of engineering research. Currently, the ETSi university community has more than 5,600 students, and over 500 professors and researchers. It is very well-positioned in international rankings, including the Shanghai ranking, where four of the School’s courses come in as the top positions in Spain, and are among the top 300 worldwide:

  • Instruments Science and Technology, position 50
  • Automation and Control, range 76-100
  • Electrical and Electronic Engineering and Mathematics, range 101-150
  • Energy Sciences and Engineering and Mechanical Engineering, range 201-300

EU, Latin American, Caribbean and Ibero-American Community Meeting on Sustainable Ecosystem Management

Seville Meeting

This week, coordinators of national biodiversity information networks linked to GBIF, the Global Biodiversity Information Facility, providing the largest biodiversity data network in the world, will work together to accelerate the development and use of data technology networks and services, with the support of the EU and the UN. The meeting will be held in the Cartuja Science & Technology Park in Seville, home to the LifeWatch ERIC ICT-Core.

Understanding and coordinating biodiversity information is essential to respond to current social and environmental challenges and for the sustainable management of ecosystems. The strategic meeting, organised by LifeWatch ERIC, will bring together 30 experts and coordinators from 15 countries in Latin America, the Caribbean and Ibero-America: Argentina, Brazil, Chile, Colombia, Costa Rica, Cuba, Ecuador, Spain, Guatemala, Mexico, Nicaragua, Peru, Portugal, Uruguay and Venezuela, with the following aims:

1. Development of a common roadmap for the development and consolidation of (e-)Infrastructures and services that, from the perspective of e-Science, contribute to:

– the best sustainable management of the territory;

– the conservation of biodiversity and the natural environment;

– the achievement of the United Nations 2030 Sustainable Development Goals, in synergy with the EU Green Deal, EU Blue Growth, EU Biodiversity Strategy 2030 and EU Farm to Fork programmes, among others.

2. Exchange of experiences and capacities in handling issues and challenges common to national and international infrastructures, data, information and knowledge in (e-)biodiversity. A consensus document of conclusions including a EU-LAC Roadmap to co-develop, build and deploy through the financial support of the relevant calls (CYTED, GBIF, Cooperation Agencies, Horizon Europe, the NDICI, etc.)

3. The development of the above based on the paradigm of biogeographical regions in the CELAC area, through national cross-border collaboration between the states involved, in collaboration with the EU and the UN, e.g., through IKRI, the Indigenous Knowledge initiative Research Initiative, based on the aforementioned financial instruments.

Participating in the inaugural session of this initiative are Christos Arvanitidis, LifeWatch ERIC CEO; Juan Miguel González Aranda, CTO and Head of LifeWatch Spain; Joe Miller, GBIF Executive Secretary; Margarita Paneque Sosa, Institutional Coordinator of CSIC in Andalusia; Francisco Pando de la Hoz, representative of GBIF Spain; Melisa Ojeda, representative of GBIF nodes in CELAC area, and many others. Javier Castroviejo Bolívar, eminent Spanish biologist, UNESCO Consultant and former president of IberoMaB, the Network of National MaB Committees and Biosphere Reserves of Ibero-America and the Caribbean, will give a keynote address.