The Hercules Supercomputer

Hercules Supercomputer

On 7 July, LifeWatch ERIC CTO and other ICT staff members visited the Hercules Supercomputer-HPC premises hosted by the CICA – Centro Informático Científico de Andalucía (Andalusian Scientific Computer Centre)–, as one of the main facilities involved in the LifeWatch ERIC AstarteWatch network. The equipment, which is located in Seville at the aforementioned centre, has a RAM of 47.5 terabytes (47,500 GB), a capacity of 1,000 TB (1 PB) and a power of calculation that is estimated at 855 teraflops, equivalent to 855 billion floating point operations per second (FLOPS), which is the parameter used to measure the effiency of this type of machine. That could be likened to nearly 4,000 mid-range PCs working at the same time!

In addition, it is made up of 232 computing nodes with 11,136 last generation processing cores. This equipment will improve the capability of the current supercomputer that CICA has by over 99%, whose characteristics are concentrated in 64 calculation nodes with 656 cores and a performance of 6.2 teraflops and 18 TB of storage.

This will considerably improve LifeWatch ERIC’s HPC capacity, in adherence with both EOSC and EuroHPC requirements.

ProMeteo Project Presented in Seville

The ProMeteo project launched by Seville City Council, which will classify and name heat waves according to their impact, and provide a network of climate shelters to protect people from excessive temperatures, will be made possible by the involvement of LifeWatch ERIC and other strategic partners.

The mayor of Seville, Antonio Muñoz, and the director of the Adrienne Arsht Rockefeller Foundation Resilience Center, Kathy Baughman McLeod, the organisation promoting the initiative, thanked partners of the project at a launch on 21 June 2022.

Seville’s pioneering strategy recognises the serious consequences that extended periods of extreme heat can have on people’s health, on animals and on the economy. Names will be attributed to heat waves and alert warnings issued on the basis on forecasts made by an algorithm capable of predicting and classifying impacts in advance.

Alongside LifeWatch ERIC, the ProMeteo initiative includes the Spanish Meteorology Agency, the University of Seville, the Pablo de Olavide University, the Carlos III Institute, the Spanish Office for Climate Change, and the Alliance “El Día Después”. For more information, click here.

United in Biodiversity: Advancing Andalusia’s Green Revolution through the Digital Transformation

Andalusia's Green Revolution

LifeWatch ERIC CTO Dr Juan Miguel González-Aranda has been featured in the Tribuna de Andalucía to present six of theprojects in which the Research Infrastructure is involved in the heartland of its ICT-Core and Statutory Seat offices. The title of the article is “United in Biodiversity: Advancing Andalusia’s Green Revolution through Digitisation”, and the ERDF projects presented demonstrate how LifeWatch ERIC uses state-of-the-art technology such as AI, Deep Learning and Virtual Research Environments to protect biodiversity, in collaboration with other important figures in the research sector, such as CSIC, the University of Malaga, the University of Granada, the Junta de Andalucía, and many more.

Additionally, by following a participatory approach to its work, LifeWatch ERIC aims to raise awareness among citizens about the important projects it has underway, which in turn can contribute to preserving the variety and richness of terrestrial, marine and transitional ecosystems.

Click here to read the full article on page 15 (in Spanish).

EU-SOLARIS at LifeWatch ERIC ICT-Core Office

EU-SOLARIS at LifeWatch ERIC ICT-Core Office

On 2 June, Eng. Antonio López-Martínez, Project Manager and Coordinator of EU-SOLARIS, visited the LifeWatch ERIC ICT-Core premises in Seville. EU-SOLARIS is the European SOLAR Research Infrastructure for Concentrated Solar Power based in Almeria (Spain), which entered the ESFRI roadmap in 2010, becoming a landmark in 2018, and which will be established as an ERIC (European Research Infrastructure Consortium) in October 2022.

EU-SOLARIS ERIC will be hosted by CIEMAT, the Centre for Energy, Environmental and Technological Research (Centro de Investigaciones Energéticas, Medioambientales y Tecnológicas) at the PSA, the Almeria Solar Platform (Plataforma Solar de Almería) premises.

The EU-SOLARIS vision is to further assist Concentrating Solar Thermal (CST) and Solar Chemistry technology deployment by enhancing the research infrastructure’s development and Research and Technology Development (R&D) coordination. EU-SOLARIS is expected to be the first of its kind, where industrial needs and private funding will play a significant role.

“LifeWatch ERIC is looking forward to the imminent establishment of EU-SOLARIS as a European Research Infrastructure Consortium”, says Dr Juan Miguel Gonzaléz-Aranda, LifeWatch ERIC Chief Technology Officer, “We are glad to welcome today Eng Lopéz-Martínez at the ICT-Core office here in Seville. We are already working together, as energy and environment are two domains which are critical for a more sustainable future”.

CSIC’s Executive Board Members visit LifeWatch ERIC ICT-Core

CSIC’s Executive Board Members visit the LifeWatch ERIC ICT Core

On Wednesday 1 June, Dr Jesús Marco de Lucas (Vice-President for Science and Technology of the National Spanish Research Council – CSIC), and Dr Margarita Peneque Sosa (Institutional Coordinator for Andalusia – CSIC) did LifeWatch ERIC the honour of visiting its ICT-Core premises. CSIC is in fact one of the main stakeholders of LifeWatch ERIC in Spain, and the two organisation are tightly working together in the framework of the SUMHAL project.
This project implements a strategy for the conservation of biodiversity in sustainable natural systems of the western Mediterranean area. Its main objective is to combine the results of the work in the field with the opportunities made available through Virtual Research Environments in terms of storage capacity, management and analytical tools, as well as the dissemination of relevant information on the conservation status of Andalusian biodiversity and ecosystems.
The SUMHAL project is contributing not only to the upgrade of the LifeWatch ERIC distributed e-Infrastructure at all levels, from hardware and software, to Human Resources and much more, but also to the enlargement of the infrastructure’s offer of Core and Thematic e-services for emerging communities of practice, focusing on Mediterranean Ecosystems.
At a critical time for its deployment at the European level, the synergies between its ICT-Core and the SUMHAL project will enable LifeWatch ERIC to provide the European scientific community with a large volume of organised systematised information made available through the European Open Science Cloud (EOSC), and at the same time ensure its compliance with LifeWatch ERIC standards.
The SUMHAL project, thanks to the pivotal role played by CISC, the most relevant research institution active in Andalusia, is designing a getaway to attract new users and engage new practitioners in Mediterranean Biodiversity and Ecosystem Research fields. This will have a positive impact on direct and indirect networking, training, communication and dissemination activities, and stimulate knowledge and technology transfer and exchange, enhancing LifeWatch ERIC’s capacity to reach out to stakeholders and international key players (GBIF, GEOSS-GEOBON, CAFF-AMBI, among others) in a transdisciplinary way.
Therefore, the SUMHAL project marks a milestone in the development of LifeWatch ERIC, opening new collaborations for the development of new green and eco-sustainable RD+I activities, and offering the latest advances in biodiversity studies to design Spanish and international, policies to tackle the global changes that are particularly affecting Mediterranean ecosystems.

LifeWatch ERIC to Collaborate in New Observatory in the Mar Menor

Observatory in the Mar Menor

Three members of the LifeWatch ERIC Executive Board, alongside collaborator Professor Angel Pérez-Ruzafa, attended the Life Transfer Summit in Murcia today, to mark the opening of an observatory in the Mar Menor, an initiative in which the research infrastructure will actively collaborate. CEO Dr Christos Arvanitidis, CTO Dr Juan Miguel González-Aranda, Service Centre Director Professor Alberto Basset and Professor Ruzafa all made presentations at the meeting, which was attended by Mr Antonio Luengo, Environmental Minister of the Murcia region, to bring his support of the infrastructure on the occasion.

The Life Transfer project, Seagrass Transplantation for Transitional Ecosystem Recovery, aims to trigger the process of recolonisation of aquatic phanerogams –known as “ecosystem engineers”– in selected Mediterranean lagoons. These lagoons are all part of Natura 2000 sites in Spain, Italy and Greece, and the project is funded through the Life programme. You can read more about the project and its initial results here.

CTO Live on ‘Despierta Andalucía’ to Speak on Ecological Crises

Despierta Andalucía

This morning, LifeWatch ERIC CTO, Juan Miguel González-Aranda, went live on Andalusian TV to discuss the ecological crises we are facing and to explain the role, the structure, and the ambition of the research infrastructure. He spoke on the programme ‘Despierta Andalucía’ of Canal Sur, noting that the region home to the LifeWatch ERIC Statutory Seat and ICT-Core is known for its excellence in the fields of open software and sustainability research.

During his interview, Dr González-Aranda explained how LifeWatch ERIC makes use of vast amounts of data and cutting-edge technology, such as remote sensing, to monitor and predict changes in the climate and ecosystems, crucial knowledge that can be shared with policymakers and used to develop solutions to the climate and biodiversity crises. He also pointed out the key relationships that the infrastructure holds with various regions all over the world –not just in Europe, but also in Africa, the Caribbean and Latin America– which allows for international collaboration in generating and interpreting data, and for the infrastructure to fulfill its ethos of “acting locally, thinking globally”.

LifeWatch ERIC would like to thank Despierta Andalucía, Canal Sur and RTVA for dedicating broadcasting time to shining a light on the current ecological crises, and for raising awareness of European initiatives like LifeWatch ERIC, which offers its free resources and services to researchers and citizen scientists globally.

Click here to watch the full interview, starting at 1:11:07.

BiCIKL Project wraps up the first year of integrating FAIR data on biodiversity

BiCIKL Seville

The fourteen partners of the BiCIKL Project met in Seville (Spain) for their first physical meeting at the beginning of May, one year after the start of the project, whose mission is to catalyse a top-down culture change in the way researchers work with data about the world’s biodiversity at each step of the research process.

“We will cultivate a more transparent, trustworthy and efficient research ecosystem,” were among the words to remember from the meeting’s opening, summarising the rationale behind BiCIKL. 

Hosted by LifeWatch ERIC, the event at La Casa de la Ciencia provided fertile ground for new ideas, as partners spent three days together discussing and analysing how their tools, workflows and platforms have evolved during the past year – and their next steps toward improvements in retrieving, preserving and linking different sources of biodiversity data.

The meeting had a strong technical focus on the transition from one-sided, uni-directional linkages between biodiversity data and infrastructures to more complex bilateral and multi-directional connections across various types of FAIR and open data. 

Dr Joe Miller, Executive Secretary of GBIF — the Global Biodiversity Information Facility — provided an initial framework for the discussions by placing the work of BiCIKL within the framework of the alliance for biodiversity knowledge

So far, such links are mainly possible within the scientific publishing process,  but that’s going to change.

“What researchers and research infrastructures would find particularly useful and enjoyable is that – as a result of our joint efforts at BiCIKL – scientific literature will become an integral part of the biodiversity research lifecycle,”  said Prof Lyubomir Penev, BiCIKL’s Project Coordinator, founder and CEO of Pensoft Publishers. “We are working on several workflows and tools that continue to facilitate the biodiversity publishing of the future even after the project’s end.”

“The most important outcome of this meeting is the return of the BiCIKL community vis-à-vis”, the Partners say, without forgetting what will be next, “Much of the knowledge about biodiversity is largely imprisoned in an ever-growing corpus of 500 million pages of scientific research publications. We are trying to liberate that information as data, make it permanently available from the Biodiversity Literature Repository, and improve international standards and practices more broadly. We include adequate support text, answering questions about biodiversity and data mining applications.

Visit BiCIKL Project’s website at https://bicikl-project.eu/

Follow BiCIKL on Twitter and Facebook. Join the conversation on Twitter at #BiCIKL_H2020.

To learn more about the projects LifeWatch ERIC is involved with, visit our Related Projects page.

Wrapping up the first year with a BiCIKL ride in Seville

BiCIKL Seville Meeting

One year after the debut of the BiCIKL Project, partners and research infrastructures will meet all together in person for the first time. A three-day of presentation of the tasks completed, bilateral meetings and technical forums will take place in Seville (Spain) between 2 – 4 May 2022.

We are all thrilled about this convention,” Project Coordinator Prof Lyubomir Penev comments. “It is going to be a huge step forward and an important moment for planning the activities to come.”

During the meeting, which will be held at La Casa de la Ciencia, Seville, LifeWatch ERIC and GBIF will be presenting The Biodiversity Knowledge Hub (BKH), a structure at the core of the BiCIKL Project.

We can’t reveal much before the meeting,” – says Christos Arvanitidis, LifeWatch ERIC CEO, “but BKH will be a single knowledge portal that helps researchers access and use interlinked and machine-readable FAIR data (Findable, Accessible, Interoperable and Reusable) relying on unique stable identifiers on specimens, genomics, observations, taxonomy and data in publications.”

There will be much more in the Andalusian venue: technical discussions will take place on linking between data classes, for instance, and the event will be wrapped up with a Forum on the BKH and the Fair Data Place.

Follow the project on Twitter for continuous updates with the hashtag #BiCIKL_H2020

Doctoral Thesis Defence on AI, Biodiversity and Sustainable Ecosystem Management 

AI biodiversity

On 27 April 2022, a presentation of a doctoral thesis by doctoral candidate Francisco Pérez-Hernández, entitled “Pre- and Post-Processing Strategies in Deep Learning for Multi-class Problems in the Field of Security and Biodiversity” took place at the “Escuela Técnica Superior de Ingeniería Informática” (ETSII) of the University of Granada. This thesis is one of the results of the Thematic Centre on Artificial Intelligence (AI) and Deep Learning, and High Mountains Ecosystems, under the umbrella of the so-called LifeWatch ERIC SMART ECOMOUNTAINS Andalusia ERDF project, hosted by the University of Granada as one of the distributed facilities engaging with LifeWatch ERIC.

This is an outstanding milestone in the application of state-of-art AI and Deep Learning techniques in, e.g., advanced satellite image processing for the study of biodiversity and ecosystems, to be made available to the scientific community and environmental decision makers in the form of a LifeWatch ERIC Virtual Research Environment.

Among those attending the defence were the doctoral tutors, supervisors and member of the evaluation committee: Juan Miguel González-Aranda, LifeWatch ERIC CTO, Enrique Herrera Viedma, Vice-Rector for Research and Transfer of the University of Granada; Siham Tabik, Professor of the Department of Computer Science and Artificial Intelligence; Francisco Herrera Triguero, Professor at the Department of Computer Science and Artificial Intelligence at the University of Granada; Domingo Alcaraz Segura Professor at the University of Granada; Juan Mario Haut Hurtado, Professor at the University of Extremadura,  and Gloria Ortega López, Professor at the University of Almería.